STRINGSTRING
Slin_4018 protein (Spirosoma linguale) - STRING interaction network
"Slin_4018" - NmrA family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4018NmrA family protein (299 aa)    
Predicted Functional Partners:
Slin_4017
AraC family transcriptional regulator (306 aa)
 
          0.858
Slin_4809
phytanoyl-CoA dioxygenase (273 aa)
   
          0.690
Slin_3831
Ethyl tert-butyl ether degradation EthD (113 aa)
   
          0.602
Slin_4019
AraC family transcriptional regulator (292 aa)
              0.593
Slin_4516
Hypothetical protein (278 aa)
   
          0.562
Slin_6227
Hypothetical protein (420 aa)
   
          0.560
Slin_5555
Hypothetical protein (269 aa)
   
          0.537
Slin_2811
Hypothetical protein (266 aa)
   
          0.536
Slin_4517
Hypothetical protein (247 aa)
   
          0.535
Slin_5556
Hypothetical protein (243 aa)
   
          0.524
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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