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Slin_4022 protein (Spirosoma linguale) - STRING interaction network
"Slin_4022" - LmbE family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4022LmbE family protein (238 aa)    
Predicted Functional Partners:
Slin_4023
Dimethylmenaquinone methyltransferase (198 aa)
 
   
    0.990
Slin_4025
Hypothetical protein (367 aa)
 
   
    0.985
Slin_4021
Catechol 2,3-dioxygenase (319 aa)
 
          0.952
Slin_4024
6-phosphogluconate dehydrogenase (263 aa)
 
          0.924
Slin_4020
Hypothetical protein (325 aa)
              0.756
Slin_1548
Catechol 2,3-dioxygenase (330 aa)
 
          0.755
Slin_1542
Monooxygenase FAD-binding protein (374 aa)
   
          0.689
Slin_4026
Xylose isomerase (311 aa)
 
          0.628
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
   
          0.590
Slin_6507
Group 1 glycosyl transferase (356 aa)
   
 
  0.534
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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