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Slin_4029 protein (Spirosoma linguale) - STRING interaction network
"Slin_4029" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4029Hypothetical protein (475 aa)    
Predicted Functional Partners:
Slin_5524
Alpha-1,2-mannosidase (774 aa)
        0.842
Slin_3892
Alpha-1,2-mannosidase (759 aa)
        0.824
Slin_2353
Alpha-1,2-mannosidase (762 aa)
        0.793
Slin_0308
alpha-L-fucosidase (463 aa)
 
          0.730
Slin_3894
Coagulation factor 5/8 type domain-containing protein (688 aa)
 
          0.709
Slin_1415
Coagulation factor 5/8 type domain-containing protein (698 aa)
 
          0.687
Slin_5005
Alpha-1,2-mannosidase (797 aa)
        0.680
Slin_1127
alpha-L-fucosidase (479 aa)
 
          0.678
Slin_4028
Hypothetical protein (194 aa)
              0.569
Slin_4030
PKD domain-containing protein (1182 aa)
   
        0.568
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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