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Slin_4047 protein (Spirosoma linguale) - STRING interaction network
"Slin_4047" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4047Hypothetical protein (370 aa)    
Predicted Functional Partners:
Slin_4049
Histidine triad (HIT) protein (289 aa)
 
          0.966
Slin_4046
Phosphoadenosine phosphosulfate reductase (368 aa)
              0.859
kptA
Phosphotransferase KptA/Tpt1; Removes the 2’-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1’’-2’’-cyclic phosphate (APPR>P). May function as an ADP- ribosylase (182 aa)
              0.859
Slin_0184
Hypothetical protein (917 aa)
   
          0.746
Slin_4061
Hypothetical protein (1351 aa)
   
          0.714
Slin_2122
Hypothetical protein (892 aa)
   
          0.686
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.575
Slin_5606
Spermine synthase (758 aa)
   
          0.564
Slin_4223
Hypothetical protein (542 aa)
   
          0.553
Slin_4224
TonB-dependent receptor plug (1063 aa)
   
          0.539
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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