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Slin_4061 protein (Spirosoma linguale) - STRING interaction network
"Slin_4061" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4061Hypothetical protein (1351 aa)    
Predicted Functional Partners:
Slin_4047
Hypothetical protein (370 aa)
   
          0.714
Slin_3586
Hypothetical protein (3324 aa)
   
          0.707
Slin_1548
Catechol 2,3-dioxygenase (330 aa)
   
          0.652
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.624
Slin_4946
Hypothetical protein (711 aa)
   
          0.577
Slin_2543
Hypothetical protein (607 aa)
   
          0.566
Slin_4060
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (334 aa)
              0.564
Slin_2796
alpha-L-fucosidase (581 aa)
   
          0.538
Slin_5007
Hypothetical protein (568 aa)
   
          0.530
Slin_4662
Hypothetical protein (409 aa)
   
          0.529
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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