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Slin_4069 protein (Spirosoma linguale) - STRING interaction network
"Slin_4069" - Heparinase II/III family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4069Heparinase II/III family protein (545 aa)    
Predicted Functional Partners:
Slin_4068
Group 1 glycosyl transferase (400 aa)
          0.985
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
 
          0.966
Slin_4072
Oxidoreductase domain-containing protein (365 aa)
 
          0.918
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
 
          0.917
Slin_4067
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase-like protein (331 aa)
              0.845
Slin_4076
Hypothetical protein (340 aa)
 
          0.703
Slin_4078
Lipopolysaccharide biosynthesis protein (349 aa)
 
          0.672
Slin_4074
Group 1 glycosyl transferase (339 aa)
              0.665
Slin_4073
Group 1 glycosyl transferase (377 aa)
              0.665
Slin_4075
Hypothetical protein (443 aa)
              0.663
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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