STRINGSTRING
Slin_4083 protein (Spirosoma linguale) - STRING interaction network
"Slin_4083" - 6-phosphogluconate dehydrogenase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_40836-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (484 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (499 aa)
 
 
  0.970
Slin_2698
6-phosphogluconolactonase (241 aa)
 
 
  0.965
Slin_0411
Carbohydrate kinase (495 aa)
       
  0.939
Slin_5727
6-phosphogluconolactonase (373 aa)
 
   
    0.934
Slin_2540
Ribulose-phosphate 3-epimerase (223 aa)
   
  0.928
Slin_2701
RpiB/LacA/LacB family sugar-phosphate isomerase (143 aa)
       
  0.910
Slin_3027
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (221 aa)
   
 
  0.869
Slin_0348
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (219 aa)
   
 
  0.869
Slin_6630
6-phosphogluconate dehydrogenase (298 aa)
   
 
0.837
Slin_3404
Short-chain dehydrogenase/reductase SDR (257 aa)
       
    0.812
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]