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Slin_4086 protein (Spirosoma linguale) - STRING interaction network
"Slin_4086" - FAD linked oxidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4086FAD linked oxidase (539 aa)    
Predicted Functional Partners:
Slin_4087
Hypothetical protein (116 aa)
              0.859
Slin_3485
UbiA prenyltransferase (291 aa)
       
  0.774
Slin_0160
UbiA prenyltransferase (291 aa)
       
  0.774
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.750
Slin_3421
RagB/SusD domain-containing protein (521 aa)
   
          0.748
Slin_0983
DoxX family protein (142 aa)
   
          0.736
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.718
Slin_6631
Fatty acid desaturase (361 aa)
   
          0.688
Slin_0482
Glycosyl transferase family protein (554 aa)
 
          0.686
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (358 aa)
     
  0.674
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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