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Slin_4115 protein (Spirosoma linguale) - STRING interaction network
"Slin_4115" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4115Hypothetical protein (2278 aa)    
Predicted Functional Partners:
Slin_6007
Endonuclease/exonuclease/phosphatase (1015 aa)
   
          0.762
Slin_6298
Hypothetical protein (221 aa)
   
          0.742
Slin_5403
Hypothetical protein (519 aa)
   
          0.714
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.711
Slin_1687
Hypothetical protein (751 aa)
   
          0.701
Slin_3307
Hypothetical protein (190 aa)
   
          0.696
Slin_1663
Lysine exporter protein LysE/YggA (212 aa)
   
          0.669
Slin_1398
Hypothetical protein (799 aa)
   
          0.662
Slin_2661
Hypothetical protein (792 aa)
   
          0.649
Slin_5493
Hypothetical protein (432 aa)
   
          0.648
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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