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Slin_4120 protein (Spirosoma linguale) - STRING interaction network
"Slin_4120" - ATPase AAA in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4120ATPase AAA (466 aa)    
Predicted Functional Partners:
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
   
  0.966
Slin_1459
ATP-binding protein; Molecular chaperone. Has ATPase activity (610 aa)
     
  0.958
Slin_2483
Histone deacetylase (300 aa)
   
    0.950
Slin_5590
DNA-directed DNA polymerase (421 aa)
   
 
    0.936
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3’-5’ exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII (359 aa)
   
 
    0.936
Slin_4114
Hypothetical protein (96 aa)
 
          0.847
Slin_5540
ABC transporter (601 aa)
 
 
  0.830
Slin_6331
ABC transporter (593 aa)
 
 
  0.821
Slin_6513
ABC transporter (613 aa)
     
  0.795
Slin_5572
ABC transporter (593 aa)
     
  0.795
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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