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Slin_4131 protein (Spirosoma linguale) - STRING interaction network
"Slin_4131" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4131Hypothetical protein (165 aa)    
Predicted Functional Partners:
Slin_4132
Hypothetical protein (202 aa)
 
          0.782
Slin_2005
Hypothetical protein (192 aa)
   
          0.605
Slin_4747
TM helix repeat-containing protein (275 aa)
   
          0.557
Slin_6411
NAD-dependent epimerase/dehydratase (357 aa)
   
          0.536
Slin_5183
NAD-dependent epimerase/dehydratase (357 aa)
   
          0.524
Slin_6291
NAD-dependent epimerase/dehydratase (357 aa)
   
          0.522
Slin_3244
Hypothetical protein (113 aa)
   
          0.514
Slin_4151
Hypothetical protein (182 aa)
   
          0.512
Slin_5283
G6PDH family F420-dependent oxidoreductase (326 aa)
   
          0.453
Slin_4414
Hypothetical protein (102 aa)
   
          0.437
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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