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Slin_4165 protein (Spirosoma linguale) - STRING interaction network
"Slin_4165" - UDP-galactopyranose mutase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4165UDP-galactopyranose mutase (373 aa)    
Predicted Functional Partners:
Slin_0280
Group 1 glycosyl transferase (403 aa)
          0.962
Slin_5260
Glycosyltransferase (405 aa)
          0.955
Slin_5839
UDP-glucose 4-epimerase (343 aa)
 
   
  0.952
Slin_4361
Family 2 glycosyl transferase (302 aa)
 
   
  0.848
Slin_4161
Glycoside hydrolase family protein (451 aa)
          0.844
Slin_5261
Glycoside hydrolase family protein (453 aa)
          0.840
Slin_0222
Amine oxidase (402 aa)
 
          0.789
Slin_0434
dTDP-4-dehydrorhamnose 3,5-epimerase (181 aa)
   
   
  0.742
Slin_4813
dTDP-4-dehydrorhamnose 3,5-epimerase (173 aa)
   
   
  0.734
Slin_4360
Polysaccharide biosynthesis protein (429 aa)
 
 
  0.726
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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