STRINGSTRING
Slin_4166 protein (Spirosoma linguale) - STRING interaction network
"Slin_4166" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4166Response regulator receiver protein (137 aa)    
Predicted Functional Partners:
Slin_5919
Hypothetical protein (169 aa)
   
          0.612
Slin_4317
Hypothetical protein (620 aa)
   
          0.590
Slin_2514
Hypothetical protein (142 aa)
   
          0.585
Slin_1881
PAS/PAC sensor signal transduction histidine kinase (435 aa)
   
          0.554
Slin_0101
PAS/PAC sensor signal transduction histidine kinase (1060 aa)
   
          0.543
Slin_2176
Histidine kinase (520 aa)
   
          0.535
Slin_2170
Response regulator receiver protein (148 aa)
   
          0.535
Slin_3100
Histidine kinase (573 aa)
   
          0.534
Slin_0795
PAS/PAC sensor signal transduction histidine kinase (911 aa)
   
          0.528
Slin_1676
Histidine kinase (881 aa)
   
          0.514
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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