STRINGSTRING
Slin_4177 protein (Spirosoma linguale) - STRING interaction network
"Slin_4177" - Amidohydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4177Amidohydrolase (509 aa)    
Predicted Functional Partners:
Slin_4957
Amidohydrolase (395 aa)
 
 
 
  0.859
Slin_3253
Amidohydrolase (384 aa)
 
 
 
  0.853
Slin_0207
Amidohydrolase (480 aa)
 
 
 
0.801
Slin_4178
aspartyl-tRNA synthetase (589 aa)
              0.550
Slin_5111
Hydantoinase/carbamoylase family amidase (447 aa)
 
   
  0.545
Slin_1563
Glycoside hydrolase family protein (1082 aa)
   
          0.496
Slin_1570
Glycosyl hydrolase (1021 aa)
   
          0.487
Slin_4900
Glycosyl hydrolase (1060 aa)
   
          0.481
Slin_4176
Hypothetical protein (113 aa)
              0.470
Slin_4376
GntR family transcriptional regulator (266 aa)
       
      0.459
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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