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Slin_4180 protein (Spirosoma linguale) - STRING interaction network
"Slin_4180" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4180Hypothetical protein (990 aa)    
Predicted Functional Partners:
Slin_2001
Hypothetical protein (500 aa)
   
          0.749
Slin_2543
Hypothetical protein (607 aa)
   
          0.735
Slin_5638
Hypothetical protein (223 aa)
   
          0.711
Slin_0364
Hypothetical protein (683 aa)
   
          0.676
Slin_1346
Hypothetical protein (384 aa)
   
          0.653
Slin_4096
Hypothetical protein (164 aa)
   
          0.650
Slin_6530
RagB/SusD domain-containing protein (521 aa)
   
          0.643
Slin_1217
Hypothetical protein (700 aa)
   
          0.643
Slin_6613
Hypothetical protein (433 aa)
   
          0.625
Slin_1108
D-alanine--D-alanine ligase; Cell wall formation (551 aa)
   
          0.610
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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