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Slin_4183 protein (Spirosoma linguale) - STRING interaction network
"Slin_4183" - GHMP kinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4183GHMP kinase (347 aa)    
Predicted Functional Partners:
Slin_5242
Inositol oxygenase (284 aa)
   
 
    0.919
Slin_2419
Beta-galactosidase (686 aa)
   
   
    0.914
Slin_4786
Glucuronate isomerase (477 aa)
         
    0.900
Slin_1060
Glucuronate isomerase (470 aa)
         
    0.900
Slin_6560
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (499 aa)
   
   
    0.824
Slin_3934
Glycoside hydrolase family protein (576 aa)
   
   
    0.822
Slin_1423
Xylan 1,4-beta-xylosidase (558 aa)
         
    0.800
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (496 aa)
         
    0.800
Slin_1237
alpha-L-arabinofuranosidase (513 aa)
         
    0.800
Slin_3438
Late embryogenesis abundant protein 2 (304 aa)
   
          0.737
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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