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Slin_4208 protein (Spirosoma linguale) - STRING interaction network
"Slin_4208" - Cyanophycinase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4208Cyanophycinase-like protein (333 aa)    
Predicted Functional Partners:
Slin_4152
Cyanophycin synthetase (895 aa)
 
     
  0.930
Slin_4154
Cyanophycinase (279 aa)
   
          0.775
Slin_2731
Cyanophycinase (295 aa)
   
          0.775
Slin_4153
Cyanophycinase (289 aa)
   
          0.774
Slin_4155
Beta-aspartyl-peptidase (306 aa)
            0.665
Slin_1546
XisI protein (115 aa)
   
          0.606
Slin_0239
XisI protein (115 aa)
   
          0.597
Slin_4209
RagB/SusD domain-containing protein (456 aa)
              0.569
Slin_5071
Hypothetical protein (190 aa)
   
          0.541
Slin_4210
TonB-dependent receptor plug (1027 aa)
              0.540
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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