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Slin_4246 protein (Spirosoma linguale) - STRING interaction network
"Slin_4246" - alpha-L-rhamnosidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4246alpha-L-rhamnosidase (793 aa)    
Predicted Functional Partners:
Slin_1470
Hypothetical protein (419 aa)
   
        0.748
Slin_4692
Hypothetical protein (721 aa)
   
          0.668
Slin_1912
Periplasmic component of the Tol biopolymer transport system-like protein (512 aa)
   
          0.654
Slin_1913
Hypothetical protein (215 aa)
   
          0.599
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
   
          0.598
Slin_1722
Hypothetical protein (381 aa)
   
        0.588
Slin_6449
Hypothetical protein (857 aa)
   
          0.549
Slin_2456
G-D-S-L family lipolytic protein (219 aa)
   
          0.545
Slin_4377
Lipase (238 aa)
   
          0.524
Slin_2035
Hypothetical protein (678 aa)
 
          0.519
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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