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Slin_4247 protein (Spirosoma linguale) - STRING interaction network
"Slin_4247" - Carbohydrate kinase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4247Carbohydrate kinase (492 aa)    
Predicted Functional Partners:
Slin_4384
Xylose isomerase (446 aa)
 
 
  0.972
Slin_0349
Xylose isomerase (443 aa)
 
 
  0.972
Slin_1236
Class II aldolase/adducin family protein (233 aa)
 
   
  0.952
Slin_2540
Ribulose-phosphate 3-epimerase (223 aa)
 
   
  0.922
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.732
Slin_4509
Alcohol dehydrogenase zinc-binding domain-containing protein (343 aa)
 
   
  0.624
Slin_6051
FAD dependent oxidoreductase (552 aa)
 
   
  0.596
Slin_5217
Alcohol dehydrogenase GroES domain-containing protein (384 aa)
   
   
  0.574
Slin_4601
Formaldehyde dehydrogenase (396 aa)
   
   
  0.574
Slin_4200
Alcohol dehydrogenase GroES domain-containing protein (385 aa)
   
   
  0.574
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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