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Slin_4260 protein (Spirosoma linguale) - STRING interaction network
"Slin_4260" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4260Hypothetical protein (301 aa)    
Predicted Functional Partners:
Slin_4261
Sulfatase (506 aa)
              0.801
Slin_4262
UDP-N-acetylglucosamine 4,6-dehydratase (338 aa)
              0.656
Slin_4259
Hypothetical protein (337 aa)
              0.616
Slin_4264
Pseudaminic acid CMP-transferase (233 aa)
              0.462
Slin_4265
Pseudaminic acid biosynthesis-associated protein PseG (344 aa)
              0.443
Slin_4263
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase (390 aa)
              0.437
Slin_4266
Pseudaminic acid biosynthesis N-acetyl transferase (180 aa)
              0.425
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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