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Slin_4270 protein (Spirosoma linguale) - STRING interaction network
"Slin_4270" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4270Hypothetical protein (499 aa)    
Predicted Functional Partners:
Slin_1599
ATP-dependent Clp protease adaptor protein ClpS (92 aa)
   
          0.667
Slin_6192
Demethylmenaquinone methyltransferase-like protein (314 aa)
   
          0.662
Slin_3224
Gliding motility-associated protein GldL (272 aa)
   
          0.659
Slin_5948
Hypothetical protein (204 aa)
   
          0.644
Slin_0116
TonB-dependent receptor plug (823 aa)
   
          0.609
Slin_5403
Hypothetical protein (519 aa)
   
          0.592
Slin_4269
Pseudaminic acid synthase (351 aa)
              0.573
Slin_4271
FkbM family methyltransferase (268 aa)
              0.568
Slin_5654
RagB/SusD domain-containing protein (511 aa)
   
          0.559
Slin_5517
Hypothetical protein (117 aa)
   
          0.537
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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