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Slin_4279 protein (Spirosoma linguale) - STRING interaction network
"Slin_4279" - Lipoprotein A in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4279Lipoprotein A (144 aa)    
Predicted Functional Partners:
Slin_4278
Hypothetical protein (303 aa)
              0.616
Slin_2865
Hypothetical protein (408 aa)
 
      0.546
Slin_0474
Peptidoglycan-binding lysin domain-containing protein (801 aa)
 
   
  0.486
Slin_3202
Peptidoglycan glycosyltransferase (654 aa)
   
   
  0.479
Slin_4500
Lytic transglycosylase (523 aa)
   
   
  0.478
Slin_5889
Phosphatase KdsC (170 aa)
   
   
  0.472
Slin_4738
Peptidoglycan glycosyltransferase (709 aa)
   
   
  0.467
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation (201 aa)
         
  0.462
hisB
Histidinol-phosphatase (382 aa)
              0.461
Slin_3220
Glycosyl transferase family protein (785 aa)
   
          0.448
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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