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Slin_4301 protein (Spirosoma linguale) - STRING interaction network
"Slin_4301" - Fibronectin type III domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4301Fibronectin type III domain-containing protein (1799 aa)    
Predicted Functional Partners:
Slin_4300
Hypothetical protein (177 aa)
              0.767
Slin_4299
Hypothetical protein (510 aa)
              0.767
Slin_5122
Hypothetical protein (1005 aa)
   
          0.746
Slin_3582
Hypothetical protein (360 aa)
   
          0.665
Slin_5723
TetR family transcriptional regulator (177 aa)
   
          0.594
Slin_4391
Radical SAM protein (327 aa)
   
          0.591
Slin_1773
Von Willebrand factor A (316 aa)
   
          0.588
Slin_4302
Integrase catalytic protein (513 aa)
              0.568
Slin_4298
Hypothetical protein (160 aa)
              0.568
Slin_4297
Hypothetical protein (256 aa)
              0.568
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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