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Slin_4322 protein (Spirosoma linguale) - STRING interaction network
"Slin_4322" - PAS/PAC sensor signal transduction histidine kinase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4322PAS/PAC sensor signal transduction histidine kinase (969 aa)    
Predicted Functional Partners:
Slin_0753
Response regulator receiver protein (146 aa)
 
 
  0.848
Slin_4374
Response regulator receiver protein (155 aa)
 
 
  0.844
Slin_2718
Response regulator receiver protein (153 aa)
 
 
  0.842
Slin_0384
Response regulator receiver protein (143 aa)
 
 
  0.823
Slin_1229
Response regulator receiver protein (154 aa)
 
 
  0.811
Slin_5222
Response regulator receiver protein (160 aa)
 
 
  0.794
Slin_5266
Response regulator receiver protein (175 aa)
   
          0.775
Slin_2170
Response regulator receiver protein (148 aa)
   
          0.772
Slin_1993
Response regulator receiver protein (135 aa)
   
          0.767
Slin_4150
Response regulator receiver protein (160 aa)
 
 
  0.757
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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