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Slin_4335 protein (Spirosoma linguale) - STRING interaction network
"Slin_4335" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4335Hypothetical protein (230 aa)    
Predicted Functional Partners:
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (449 aa)
              0.748
Slin_4333
FG-GAP repeat-containing protein (758 aa)
              0.571
Slin_4336
beta-N-acetylhexosaminidase (553 aa)
              0.538
Slin_5461
Membrane bound O-acyl transferase MBOAT family protein (479 aa)
   
        0.460
Slin_3863
Membrane bound O-acyl transferase MBOAT family protein (475 aa)
   
        0.460
Slin_2950
Membrane bound O-acyl transferase MBOAT family protein (510 aa)
   
        0.460
Slin_4846
Hypothetical protein (230 aa)
   
          0.442
Slin_3982
SMP-30/gluconolaconase/LRE domain-containing protein (305 aa)
 
          0.414
Slin_4332
Hypothetical protein (121 aa)
              0.410
Slin_4845
Hypothetical protein (170 aa)
   
          0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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