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Slin_4358 protein (Spirosoma linguale) - STRING interaction network
"Slin_4358" - NAD-dependent epimerase/dehydratase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4358NAD-dependent epimerase/dehydratase (327 aa)    
Predicted Functional Partners:
Slin_4357
WecB/TagA/CpsF family glycosyl transferase (260 aa)
 
          0.887
Slin_4359
Cupin (114 aa)
              0.859
Slin_4356
Sugar transferase (225 aa)
   
   
  0.824
Slin_4365
Group 1 glycosyl transferase (422 aa)
   
   
  0.713
Slin_4362
Group 1 glycosyl transferase (390 aa)
   
   
  0.713
Slin_4355
Capsular exopolysaccharide family protein (767 aa)
   
   
  0.711
Slin_6307
Capsular exopolysaccharide family protein (772 aa)
   
 
  0.706
Slin_4360
Polysaccharide biosynthesis protein (429 aa)
   
   
  0.686
Slin_4361
Family 2 glycosyl transferase (302 aa)
         
  0.658
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.655
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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