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Slin_4382 protein (Spirosoma linguale) - STRING interaction network
"Slin_4382" - L-fucose isomerase-like protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4382L-fucose isomerase-like protein; Catalyzes the conversion of L-arabinose to L-ribulose (498 aa)    
Predicted Functional Partners:
araB
L-ribulokinase (544 aa)
 
   
  0.781
Slin_4381
TonB-dependent receptor (1071 aa)
              0.738
Slin_1249
alpha-L-rhamnosidase (951 aa)
   
          0.729
Slin_6430
alpha-L-rhamnosidase (757 aa)
   
          0.694
Slin_3580
alpha-L-rhamnosidase (918 aa)
   
          0.667
Slin_4380
RagB/SusD domain-containing protein (478 aa)
              0.646
Slin_4383
Major facilitator superfamily protein (420 aa)
 
          0.636
Slin_6613
Hypothetical protein (433 aa)
   
          0.631
Slin_2260
Hypothetical protein (319 aa)
   
          0.593
Slin_1236
Class II aldolase/adducin family protein (233 aa)
 
   
  0.586
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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