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Slin_4391 protein (Spirosoma linguale) - STRING interaction network
"Slin_4391" - Radical SAM protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4391Radical SAM protein (327 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (339 aa)
       
  0.916
Slin_5723
TetR family transcriptional regulator (177 aa)
   
          0.744
Slin_5122
Hypothetical protein (1005 aa)
   
          0.743
Slin_0240
Radical SAM protein (340 aa)
   
          0.707
Slin_3587
Hypothetical protein (1087 aa)
   
          0.696
Slin_4390
Hypothetical protein (433 aa)
              0.664
Slin_5348
AsnC family transcriptional regulator (156 aa)
   
 
  0.642
Slin_2901
AsnC family transcriptional regulator (154 aa)
   
 
  0.642
Slin_2721
AsnC family transcriptional regulator (158 aa)
   
 
  0.642
Slin_4291
Fibronectin type III domain-containing protein (2603 aa)
   
          0.630
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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