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Slin_4395 protein (Spirosoma linguale) - STRING interaction network
"Slin_4395" - Stress responsive alpha-beta barrel domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4395Stress responsive alpha-beta barrel domain-containing protein (99 aa)    
Predicted Functional Partners:
Slin_5719
Hypothetical protein (298 aa)
   
          0.638
Slin_1879
Hypothetical protein (629 aa)
   
          0.587
Slin_4673
Xylose isomerase (341 aa)
   
          0.576
Slin_1046
Hypothetical protein (1066 aa)
   
          0.575
Slin_5653
FG-GAP repeat-containing protein (1208 aa)
   
          0.568
Slin_1890
Hypothetical protein (171 aa)
   
          0.560
Slin_1009
Xylose isomerase (308 aa)
   
          0.559
Slin_4950
Twin-arginine translocation pathway signal (212 aa)
   
          0.553
Slin_5445
FG-GAP repeat-containing protein (1203 aa)
   
          0.546
Slin_1045
Hypothetical protein (482 aa)
   
          0.543
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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