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Slin_4427 protein (Spirosoma linguale) - STRING interaction network
"Slin_4427" - Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4427Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (420 aa)    
Predicted Functional Partners:
Slin_5341
Hypothetical protein (300 aa)
   
          0.663
Slin_1663
Lysine exporter protein LysE/YggA (212 aa)
   
          0.661
Slin_2380
Hypothetical protein (155 aa)
   
          0.645
Slin_3255
ECF subfamily RNA polymerase sigma-24 subunit (183 aa)
   
          0.627
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (301 aa)
              0.622
Slin_2437
Hypothetical protein (178 aa)
 
          0.605
Slin_2964
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
   
          0.605
Slin_3835
Hypothetical protein (137 aa)
   
          0.581
Slin_5846
Short-chain dehydrogenase/reductase SDR (262 aa)
   
          0.579
Slin_5605
Hypothetical protein (361 aa)
   
          0.572
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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