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Slin_4432 protein (Spirosoma linguale) - STRING interaction network
"Slin_4432" - beta-Ig-H3/fasciclin in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4432beta-Ig-H3/fasciclin (318 aa)    
Predicted Functional Partners:
Slin_4248
beta-Ig-H3/fasciclin (183 aa)
 
          0.818
Slin_3070
beta-Ig-H3/fasciclin (354 aa)
 
          0.780
Slin_4431
FKBP-type peptidylprolyl isomerase (311 aa)
 
          0.658
Slin_4433
UDP diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (245 aa)
              0.566
Slin_1399
beta-Ig-H3/fasciclin (192 aa)
 
       
0.421
Slin_4434
Outer membrane protein assembly complex, YaeT protein (865 aa)
              0.403
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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