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Slin_4437 protein (Spirosoma linguale) - STRING interaction network
"Slin_4437" - Acriflavin resistance protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4437Acriflavin resistance protein (1078 aa)    
Predicted Functional Partners:
Slin_4438
RND family efflux transporter MFP subunit (363 aa)
 
   
  0.974
Slin_4439
Hypothetical protein (508 aa)
              0.859
Slin_2361
RND family efflux transporter MFP subunit (372 aa)
 
 
  0.790
Slin_6592
RND family efflux transporter MFP subunit (378 aa)
 
 
  0.764
Slin_4440
Hypothetical protein (200 aa)
              0.763
Slin_1021
RND family efflux transporter MFP subunit (390 aa)
 
   
  0.762
Slin_0822
RND family efflux transporter MFP subunit (390 aa)
 
 
  0.728
Slin_2947
RND family efflux transporter MFP subunit (363 aa)
   
 
  0.688
Slin_4444
Cation/multidrug efflux pump-like protein (1044 aa)
 
       
0.648
Slin_6327
Preprotein translocase subunit YajC (108 aa)
   
 
      0.586
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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