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Slin_4453 protein (Spirosoma linguale) - STRING interaction network
"Slin_4453" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4453Hypothetical protein (409 aa)    
Predicted Functional Partners:
Slin_2380
Hypothetical protein (155 aa)
   
          0.715
Slin_5341
Hypothetical protein (300 aa)
   
          0.689
Slin_4454
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1149 aa)
 
          0.661
Slin_3585
Hypothetical protein (324 aa)
   
          0.650
Slin_3835
Hypothetical protein (137 aa)
   
          0.630
Slin_3255
ECF subfamily RNA polymerase sigma-24 subunit (183 aa)
   
          0.629
Slin_2964
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
   
          0.615
Slin_1663
Lysine exporter protein LysE/YggA (212 aa)
   
          0.602
Slin_4397
Hypothetical protein (303 aa)
   
          0.581
Slin_0031
Hypothetical protein (345 aa)
   
          0.575
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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