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Slin_4461 protein (Spirosoma linguale) - STRING interaction network
"Slin_4461" - Peptidase M15D vanX D-ala-D-ala dipeptidase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4461Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide (244 aa)    
Predicted Functional Partners:
Slin_4460
Nucleoside recognition protein domain-containing protein (411 aa)
              0.659
Slin_2885
Hypothetical protein (289 aa)
   
          0.593
Slin_4459
Hypothetical protein (56 aa)
              0.497
Slin_4694
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (318 aa)
         
  0.461
Slin_3550
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (329 aa)
         
  0.461
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
     
  0.440
Slin_1509
Hypothetical protein (172 aa)
   
          0.419
Slin_1108
D-alanine--D-alanine ligase; Cell wall formation (551 aa)
     
 
  0.417
Slin_5436
Hypothetical protein (505 aa)
   
          0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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