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Slin_4465 protein (Spirosoma linguale) - STRING interaction network
"Slin_4465" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4465Hypothetical protein (199 aa)    
Predicted Functional Partners:
Slin_0742
LmbE family protein (882 aa)
   
          0.768
Slin_5545
Hypothetical protein (165 aa)
   
          0.671
Slin_3780
Hypothetical protein (182 aa)
   
          0.610
Slin_3484
Group 1 glycosyl transferase (379 aa)
   
          0.609
Slin_4487
Thioredoxin (196 aa)
   
          0.604
Slin_0340
Hypothetical protein (367 aa)
   
          0.604
Slin_1913
Hypothetical protein (215 aa)
   
          0.565
Slin_4464
Glucosamine/fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (612 aa)
              0.558
Slin_2367
Peptidase M14, carboxypeptidase A (580 aa)
   
          0.550
Slin_0030
TonB-dependent receptor plug (786 aa)
   
          0.545
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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