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Slin_4483 protein (Spirosoma linguale) - STRING interaction network
"Slin_4483" - Preprotein translocase subunit SecE in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4483Preprotein translocase subunit SecE (63 aa)    
Predicted Functional Partners:
Slin_0630
Hypothetical protein (204 aa)
   
          0.748
Slin_5161
Hypothetical protein (428 aa)
   
          0.728
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination (186 aa)
              0.714
Slin_2018
Hypothetical protein (686 aa)
   
          0.704
Slin_5969
Gliding motility-associated lipoprotein GldH (158 aa)
   
          0.702
Slin_3080
Hypothetical protein (1564 aa)
   
          0.697
Slin_3223
Gliding motility-associated protein GldM (528 aa)
   
          0.690
Slin_3224
Gliding motility-associated protein GldL (272 aa)
   
          0.689
Slin_2013
Hypothetical protein (597 aa)
   
          0.684
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (395 aa)
              0.683
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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