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Slin_4488 protein (Spirosoma linguale) - STRING interaction network
"Slin_4488" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4488Hypothetical protein (223 aa)    
Predicted Functional Partners:
Slin_3588
FAD dependent oxidoreductase (354 aa)
 
 
      0.661
Slin_4489
Hypothetical protein (169 aa)
              0.609
Slin_4487
Thioredoxin (196 aa)
              0.560
Slin_2038
Hypothetical protein (1024 aa)
   
          0.558
Slin_6518
Hypothetical protein (309 aa)
   
          0.555
Slin_2433
Multiple antibiotic resistance (MarC)-like protein (191 aa)
   
          0.554
Slin_4280
Hypothetical protein (108 aa)
   
          0.526
Slin_1477
FAD dependent oxidoreductase (420 aa)
     
      0.525
Slin_0149
Sarcosine oxidase (385 aa)
     
      0.525
Slin_3013
uroporphyrin-III C/tetrapyrrole methyltransferase (233 aa)
 
   
  0.496
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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