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Slin_4506 protein (Spirosoma linguale) - STRING interaction network
"Slin_4506" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4506Hypothetical protein (436 aa)    
Predicted Functional Partners:
Slin_4505
TonB-dependent receptor plug (1046 aa)
 
          0.915
Slin_4224
TonB-dependent receptor plug (1063 aa)
   
          0.757
Slin_4223
Hypothetical protein (542 aa)
   
          0.756
Slin_1312
Hypothetical protein (169 aa)
   
          0.747
Slin_3490
Hypothetical protein (264 aa)
   
          0.737
Slin_6010
Outer membrane efflux protein (462 aa)
   
          0.732
Slin_1769
TonB-dependent receptor plug (1085 aa)
   
          0.727
Slin_2413
RagB/SusD domain-containing protein (480 aa)
   
          0.724
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.722
Slin_2866
Hypothetical protein (277 aa)
   
          0.722
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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