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Slin_4515 protein (Spirosoma linguale) - STRING interaction network
"Slin_4515" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4515Hypothetical protein (166 aa)    
Predicted Functional Partners:
Slin_4243
Hypothetical protein (245 aa)
   
          0.723
Slin_0417
Hypothetical protein (389 aa)
   
          0.681
Slin_4581
Hypothetical protein (494 aa)
   
          0.657
Slin_2155
Transcriptional regulator (534 aa)
   
          0.638
Slin_6152
Hypothetical protein (418 aa)
   
          0.593
Slin_1645
Hypothetical protein (300 aa)
   
          0.589
Slin_5187
Peptidase M56 BlaR1 (750 aa)
   
          0.559
Slin_1077
Hypothetical protein (176 aa)
   
          0.544
Slin_3082
Hypothetical protein (382 aa)
   
          0.530
Slin_6097
Histidine kinase (469 aa)
   
          0.527
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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