STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4515KEGG: mxa:MXAN_0238 hypothetical protein. (166 aa)    
Predicted Functional Partners:
Slin_4243
KEGG: mxa:MXAN_0161 hypothetical protein.
  
     0.644
Slin_4244
PFAM: oxidoreductase molybdopterin binding; KEGG: dac:Daci_3134 oxidoreductase molybdopterin binding.
 
     0.467
Slin_4514
Aspartate kinase; KEGG: hypothetical protein; K00003 homoserine dehydrogenase; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate/glutamate/uridylate kinase.
       0.432
Slin_2857
PFAM: Domain of unknown function DUF2382-like; KEGG: met:M446_3629 hypothetical protein.
  
     0.426
Slin_3668
KEGG: mch:Mchl_3369 hypothetical protein.
  
     0.404
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.