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Slin_4524 protein (Spirosoma linguale) - STRING interaction network
"Slin_4524" - Biotin carboxylase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4524Biotin carboxylase (403 aa)    
Predicted Functional Partners:
Slin_4527
Esterase (358 aa)
 
          0.889
Slin_1340
Esterase (234 aa)
 
          0.845
Slin_1338
Hypothetical protein (352 aa)
 
          0.779
Slin_0220
Hypothetical protein (242 aa)
 
          0.739
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (491 aa)
 
          0.670
Slin_6152
Hypothetical protein (418 aa)
   
          0.660
Slin_1316
Glutamate--cysteine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (366 aa)
 
          0.624
Slin_2577
Hypothetical protein (356 aa)
   
          0.614
Slin_5097
Hypothetical protein (727 aa)
   
          0.606
Slin_3212
Beta-lactamase (304 aa)
   
          0.554
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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