STRINGSTRING
Slin_4563 protein (Spirosoma linguale) - STRING interaction network
"Slin_4563" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4563Hypothetical protein (233 aa)    
Predicted Functional Partners:
Slin_4562
Hypothetical protein (549 aa)
              0.740
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.723
Slin_5342
Hypothetical protein (426 aa)
   
          0.623
Slin_3399
Hypothetical protein (531 aa)
   
          0.599
Slin_2453
RagB/SusD domain-containing protein (540 aa)
   
          0.570
Slin_4760
TonB-dependent receptor plug (1100 aa)
   
          0.564
Slin_4761
RagB/SusD domain-containing protein (590 aa)
   
          0.543
Slin_0802
Hypothetical protein (538 aa)
   
          0.526
Slin_3934
Glycoside hydrolase family protein (576 aa)
   
          0.523
Slin_4564
Hypothetical protein (171 aa)
 
          0.503
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]