STRINGSTRING
Slin_4575 protein (Spirosoma linguale) - STRING interaction network
"Slin_4575" - Filamentation induced by cAMP protein fic in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4575Filamentation induced by cAMP protein fic (377 aa)    
Predicted Functional Partners:
Slin_4574
Hypothetical protein (417 aa)
              0.787
Slin_0922
ATPase (139 aa)
 
          0.514
Slin_3089
Restriction modification system DNA specificity domain-containing protein (520 aa)
 
     
  0.485
Slin_6258
N-6 DNA methylase (787 aa)
     
      0.466
Slin_3088
Adenine-specific DNA-methyltransferase (502 aa)
     
      0.466
Slin_5456
MazE family transcriptional regulator (85 aa)
   
          0.420
Slin_4579
Hypothetical protein (322 aa)
              0.417
Slin_4578
Hypothetical protein (1086 aa)
              0.417
Slin_4577
Hypothetical protein (212 aa)
              0.417
Slin_4576
Hypothetical protein (435 aa)
              0.417
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]