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Slin_4581 protein (Spirosoma linguale) - STRING interaction network
"Slin_4581" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4581Hypothetical protein (494 aa)    
Predicted Functional Partners:
Slin_3405
Hypothetical protein (565 aa)
   
          0.754
Slin_3379
Hypothetical protein (906 aa)
   
          0.731
Slin_1500
PepSY-associated TM helix domain-containing protein (212 aa)
   
          0.706
Slin_1501
ApbE family lipoprotein (509 aa)
   
          0.693
Slin_3952
Hypothetical protein (327 aa)
   
          0.686
Slin_4583
acyl-ACP desaturase (325 aa)
              0.684
Slin_4582
Histidine kinase (455 aa)
              0.684
Slin_4515
Hypothetical protein (166 aa)
   
          0.657
Slin_3990
Peptidase M14 carboxypeptidase A (942 aa)
   
          0.637
Slin_0971
Hypothetical protein (932 aa)
   
          0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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