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Slin_4601 protein (Spirosoma linguale) - STRING interaction network
"Slin_4601" - Formaldehyde dehydrogenase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4601Formaldehyde dehydrogenase (396 aa)    
Predicted Functional Partners:
Slin_0109
Cupin (377 aa)
 
          0.671
Slin_0950
Cupin (389 aa)
 
          0.653
Slin_4600
Hypothetical protein (134 aa)
   
        0.647
Slin_4346
Catalase (716 aa)
   
 
  0.597
Slin_2900
Catalase (550 aa)
   
 
  0.597
Slin_4247
Carbohydrate kinase (492 aa)
   
   
  0.574
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
   
   
  0.574
Slin_0411
Carbohydrate kinase (495 aa)
   
   
  0.574
Slin_4509
Alcohol dehydrogenase zinc-binding domain-containing protein (343 aa)
 
 
 
  0.561
Slin_6198
Short-chain dehydrogenase/reductase SDR (260 aa)
   
   
  0.516
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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