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Slin_4654 protein (Spirosoma linguale) - STRING interaction network
"Slin_4654" - HxlR family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4654HxlR family transcriptional regulator (110 aa)    
Predicted Functional Partners:
Slin_4655
Linoleoyl-CoA desaturase (381 aa)
              0.856
Slin_2078
HxlR family transcriptional regulator (141 aa)
   
          0.777
Slin_4656
Cyclopropane-fatty-acyl-phospholipid synthase (301 aa)
              0.684
Slin_4657
Transglutaminase (289 aa)
   
        0.609
Slin_1725
NAD-dependent epimerase/dehydratase (214 aa)
   
   
  0.486
Slin_3928
Zinc-binding alcohol dehydrogenase (337 aa)
   
        0.408
Slin_3759
NmrA family protein (292 aa)
   
        0.407
Slin_3737
NmrA family protein (294 aa)
   
        0.407
Slin_2467
NmrA family protein (287 aa)
   
        0.407
Slin_2059
NmrA family protein (287 aa)
   
        0.407
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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