STRINGSTRING
Slin_4662 protein (Spirosoma linguale) - STRING interaction network
"Slin_4662" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4662Hypothetical protein (409 aa)    
Predicted Functional Partners:
Slin_5108
Hypothetical protein (387 aa)
   
          0.772
Slin_4663
PA-phosphatase-like phosphoesterase (515 aa)
 
          0.700
Slin_3122
Hypothetical protein (437 aa)
   
          0.680
Slin_4660
PA-phosphatase-like phosphoesterase (502 aa)
 
          0.657
Slin_4223
Hypothetical protein (542 aa)
   
          0.651
Slin_3421
RagB/SusD domain-containing protein (521 aa)
   
          0.636
Slin_3400
TonB-dependent receptor plug (1057 aa)
   
          0.626
Slin_1280
Penicillin-binding protein transpeptidase (1323 aa)
   
          0.622
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.612
Slin_1558
Hypothetical protein (403 aa)
   
          0.606
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (12%) [HD]