STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4666KEGG: rpi:Rpic_2527 hypothetical protein. (371 aa)    
Predicted Functional Partners:
Slin_4665
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_00138 TonB-dependent receptor.
 
     0.640
Slin_0012
Acetyltransferase; KEGG: mxa:MXAN_2839 acetyltransferase.
  
     0.625
Slin_4663
PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related.
 
     0.621
Slin_2853
Hypothetical protein.
  
     0.620
Slin_3898
KEGG: mlo:mlr2180 hypothetical protein.
  
     0.598
Slin_5055
PFAM: phosphoesterase PA-phosphatase related; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related.
 
     0.595
Slin_4664
Hypothetical protein.
 
     0.588
Slin_5972
Hypothetical protein; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related.
 
     0.567
Slin_3033
Hypothetical protein; KEGG: nmu:Nmul_A0927 phosphoesterase, PA- phosphatase related.
 
     0.543
Slin_5252
PFAM: protein of unknown function DUF6 transmembrane; KEGG: sat:SYN_00035 DMT family permease.
  
     0.525
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.