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Slin_4670 protein (Spirosoma linguale) - STRING interaction network
"Slin_4670" - NMT1/THI5 like domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4670NMT1/THI5 like domain-containing protein (318 aa)    
Predicted Functional Partners:
Slin_5401
Molybdopterin oxidoreductase (1228 aa)
   
   
  0.579
Slin_3497
TenA family transcriptional regulator (216 aa)
 
   
  0.565
ligA
NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (696 aa)
       
      0.511
Slin_4671
NUDIX hydrolase (257 aa)
   
        0.484
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) (268 aa)
 
     
  0.474
Slin_5860
Oxidoreductase alpha (molybdopterin) subunit (792 aa)
   
   
  0.457
Slin_0131
Molybdopterin oxidoreductase (788 aa)
   
   
  0.457
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
         
  0.443
Slin_2051
Sulfite reductase (720 aa)
         
  0.439
Slin_3496
Phosphomethylpyrimidine kinase (268 aa)
   
   
  0.415
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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