STRINGSTRING
Slin_4693 protein (Spirosoma linguale) - STRING interaction network
"Slin_4693" - L-lactate transport in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4693L-lactate transport (589 aa)    
Predicted Functional Partners:
Slin_5063
D-lactate dehydrogenase (1009 aa)
   
   
  0.850
Slin_4649
D-lactate dehydrogenase (1034 aa)
   
   
  0.850
Slin_3931
Hypothetical protein (459 aa)
 
   
  0.797
Slin_1817
FMN-dependent alpha-hydroxy acid dehydrogenase (349 aa)
   
   
  0.744
Slin_3932
Hypothetical protein (245 aa)
 
   
  0.720
Slin_2628
GntR family transcriptional regulator (234 aa)
 
   
  0.591
Slin_5544
Hypothetical protein (267 aa)
   
   
  0.582
Slin_5543
Hypothetical protein (456 aa)
   
   
  0.582
Slin_4694
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (318 aa)
   
   
  0.562
Slin_6373
FAD linked oxidase (448 aa)
   
   
  0.528
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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