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Slin_4705 protein (Spirosoma linguale) - STRING interaction network
"Slin_4705" - Lanthionine synthetase C family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4705Lanthionine synthetase C family protein (414 aa)    
Predicted Functional Partners:
Slin_4704
Lantibiotic dehydratase domain-containing protein (1060 aa)
 
     
  0.953
Slin_4714
Lantibiotic dehydratase domain-containing protein (1055 aa)
 
     
  0.857
Slin_2131
Lantibiotic dehydratase domain-containing protein (1013 aa)
 
     
  0.839
Slin_0903
Lantibiotic dehydratase domain-containing protein (1036 aa)
 
     
  0.839
Slin_3992
Hypothetical protein (532 aa)
   
          0.737
Slin_4703
Hypothetical protein (310 aa)
              0.721
Slin_4702
Hypothetical protein (201 aa)
              0.721
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
   
          0.710
Slin_4700
Hypothetical protein (182 aa)
 
          0.705
Slin_4701
ABC transporter (728 aa)
 
          0.703
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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